Major cleanup

Originally this branch was intended to only integrate dune-alugrid
support, but it ended up in major cleanup. It now features:

* dune-alugrid is used everywhere
* StructuredGridFactory is used instead of
  src/utility/gridexamples.hh
* Some tabs in the white space disappeared
* All changes are compliant with cmake, esp. those that require
  files in the build directory
* The mimetic code has been removed
* All applications have been successfully run with all grid
  managers

This branch is only intended to make everything work with cmake and
dune-alugrid. I have seen hundreds of things which could be
changed/improved while working on it...

Fixes #1.

See merge request !1

we now follow the version scheme of the core modules, thus the
upcoming pdelab release will be 2.4

It is beyond fixing and was not ported.

- some typos which were not covered without alberta being installed
- Forcing the creation of vtk subfolder in build tree
- symlinking some input files (ini)
- Remove "const GV& gv"'s appearance

Most of the code in gridexamples jsut reimplements the StructuredGridFactory.
This commit uses the factory directly.

While at it, I also removed tabulators from the howto.

Conflicts:
	src/convection-diffusion/CMakeLists.txt
	src/convection-diffusion/scalabilitytest.cc

Merge the enable all packages feature into master.
To have this in the release, it should get some more testing.

The partitioner implemented here had the same functionality
but was still using Dune::FieldVectors, which is not possible
anymore.

latex-beamer for the Heidelberg Dune Course 2015:

ERROR: Undefined control sequence.

--- TeX said ---
l.983 \paragraph
                {Vertex-centered Finite Volumes}
--- HELP ---
TeX encountered an unknown command name. You probably misspelled the
name. If this message occurs when a LaTeX command is being processed,
the command is probably in the wrong place---for example, the error
can be produced by an \item command that's not inside a list-making
environment. The error can also be caused by a missing \documentclass
command.

(cherry picked from commit f90d57d7)

Olaf Ippisch authored 10 years ago and Steffen Müthing committed 10 years ago

(cherry picked from commit c30bb29a)

Peter Bastian authored 10 years ago and Steffen Müthing committed 10 years ago

(cherry picked from commit a81fb5cd)

Peter Bastian authored 10 years ago and Steffen Müthing committed 10 years ago

(cherry picked from commit eb77e01e)

The signature of the loadbalance method has recently changed.

With the new macro that adds all flags to all targets,
CMakeLists files in most cases boil down to an add_executable line.

When compiling the pdelab-howto, I got the error:

/home/mblatt/src/dune/current/dune-pdelab-howto/src/navier-stokes/cgstokes.cc: In function ‘void navierstokes(const GV&, std::string, const PRM&, V_FEM&, P_FEM&, IF&)’:
/home/mblatt/src/dune/current/dune-pdelab-howto/src/navier-stokes/cgstokes.cc:149:3: error: ‘Newton’ is not a member of ‘Dune::PDELab’

The header newton.hh was never included which is fixed with this
commit. Seems kind of weired that nobody has noticed this. Must be my
aura ;)

* releases/2.0:
  [autotools] Make sure we actually distribute the shiny new config.h.cmake

Kudos to Christoph for reminding me...

* releases/2.0:
  [CMake] add version defines to the config.h.cmake

Andreas Nüßing authored 10 years ago and Steffen Müthing committed 10 years ago

When checking for a certain dune-pdelab-howto version using
DUNE_VERSION_NEWER, the defines where not present and
the makro did not work.

accidentally changed too many lines

This reverts commit fd4a9afb.

Pull in fixes from release branch

* releases/2.0:
  [Release] Update version information and release notes for 2.0.0
  [Documentation] Mention dune-typetree source package download location
  [Buildsystem] Clean up build in boilerplateturial
  [Boilerplate] Make sure to use correct geometry type for all grids
  [Git] Add build-cmake to .gitignore.
  [Documentation] Remove unecessary LaTeX packages.
  [Documentation] Fix introduction of 2.0 release in RELEASE_NOTES
  [Documentation] Update release notes and bump version to 2.0.0-rc2
  [Dependencies] Bump version requirements of the core modules to 2.3.1
  [Documentation] Remove notice to use the release branch of the core modules - 2.3.1 has been released
  [Cleanup] Fix trailing whitespace in Howto TeX files
  [Howto] Fix compilation problem in beamer mode
  [Bugfix][Howto] Work around abug in the interaction between KOMAScript and headings
  [Howto] Fix warnings about deprecated LaTeX macros
  [Release] Update version information for dune-pdelab-howto 2.0.0-rc1

Conflicts:
	README
	dune.module

Both autotools and cmake were set up rather strangely in
boilerplateturial. This patches improves things by

- not requiring ALUGrid to build anymore. Most programs don't even use
  it, and the ones that do fall back gracefully to YaspGrid if
  required.

- removing bogus lists of EIGENPROGRAMS and SUPERLUPROGRAMS in
  Makefile.am.

- including missing flags for UG and ALBERTA in CMakeLists.txt.

Thanks to Adrian for testing the release candidate and reporting the
problem.

Christoph Grüninger authored 10 years ago and Steffen Müthing committed 10 years ago

Make it a little easier to compile the howto...

I messed up when editing the release notes, creating a Frankenstein
text made up of bits that pertained to 1.1 and to 2.0.

Replace that mess with a correct text.

PDELab doesn't work correctly with the 2.3.0 release of the core
modules, so we better reflect that in the dependency requirements stated
in the dune.module file.

[Documentation] Remove notice to use the release branch of the core modules - 2.3.1 has been released